Enables SUMO polymer binding activity and peptidase inhibitor activity. Located in PML body and sarcomere. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for SIMC1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = SIMC1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of SIMC1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr5:176,172,154–176,172,641 | 65.8 kb | Distal (>10kb) Multiome | 15 | |
| chr5:176,183,360–176,184,067 | 54.6 kb | Distal (>10kb) Multiome | 165 | |
| chr5:176,238,236–176,238,453 | at TSS | At TSS | 71 | |
| chr5:176,361,095–176,362,133 | 123.4 kb | Distal (>10kb) Multiome | 877 | |
| chr5:176,365,184–176,366,532 | 127.2 kb | Distal (>10kb) Multiome | 352 | |
| chr5:176,388,019–176,389,614 | 150.6 kb | Distal (>10kb) Multiome | 1052 | |
| chr5:176,415,859–176,416,971 | 178.3 kb | Distal (>10kb) Multiome | 827 | |
| chr5:176,441,967–176,442,454 | 203.8 kb | Distal (>10kb) Multiome | 166 | |
| chr5:176,447,162–176,449,016 | 209.9 kb | Distal (>10kb) Multiome | 859 | |
| chr5:176,536,385–176,538,671 | 299.6 kb | Distal (>10kb) Multiome | 1006 |
Genomic view of the SIMC1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.