PRPSAP1
phosphoribosyl pyrophosphate synthetase associated protein 1 | PAP39

Enables identical protein binding activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Jul 2025]

Member of: DE-11
Biological processes 10 terms
Expression (TPM)
PRPSAP1 — as a Regulated Gene

TFs regulating PRPSAP1 0 TFs

Transcription factors with Perturb-seq knockdown data for PRPSAP1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = PRPSAP1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to PRPSAP1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of PRPSAP1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr17:76,072,173–76,072,853 281.3 kb Distal (>10kb) Multiome 893
chr17:76,074,414–76,075,796 279.3 kb Distal (>10kb) Multiome 280
chr17:76,103,272–76,104,343 250.1 kb Distal (>10kb) Multiome 798
chr17:76,121,142–76,122,265 232.3 kb Distal (>10kb) Multiome 689
chr17:76,132,004–76,133,216 221.2 kb Distal (>10kb) Multiome 536
chr17:76,135,151–76,135,652 218.7 kb Distal (>10kb) Multiome 104
chr17:76,141,012–76,141,958 212.5 kb Distal (>10kb) Multiome 616
chr17:76,240,278–76,241,169 113.2 kb Distal (>10kb) Multiome 560
chr17:76,264,834–76,266,286 88.8 kb Distal (>10kb) Multiome 868
chr17:76,353,245–76,354,535 111 bp At TSS Multiome 1071
chr17:76,383,686–76,385,081 30.6 kb Distal (>10kb) Multiome 823
chr17:76,385,493–76,386,382 32.1 kb Distal (>10kb) Multiome 935
chr17:76,452,469–76,453,735 99.3 kb Distal (>10kb) Multiome 726
chr17:76,500,907–76,502,333 147.5 kb Distal (>10kb) Multiome 728
chr17:76,506,248–76,506,840 152.6 kb Distal (>10kb) Multiome 550
chr17:76,537,326–76,538,627 183.9 kb Distal (>10kb) Multiome 192
chr17:76,540,451–76,541,323 187.1 kb Distal (>10kb) Multiome 478
chr17:76,557,376–76,557,942 203.8 kb Distal (>10kb) Multiome 906
chr17:76,585,404–76,586,417 232.0 kb Distal (>10kb) Multiome 591
chr17:76,612,985–76,613,550 259.4 kb Distal (>10kb) Multiome 308

Genome Browser

Genomic view of the PRPSAP1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr17:76,062,173 – 76,623,550
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq