Guanylyl cyclases, catalyzing the production of cGMP from GTP, are classified as soluble and membrane forms (Garbers and Lowe, 1994 [PubMed 7982997]). The membrane guanylyl cyclases, often termed guanylyl cyclases A through F, form a family of cell-surface receptors with a similar topographic structure: an extracellular ligand-binding domain, a single membrane-spanning domain, and an intracellular region that contains a protein kinase-like domain and a cyclase catalytic domain. GC-A and GC-B function as receptors for natriuretic peptides; they are also referred to as atrial natriuretic peptide receptor A (NPR1) and type B (NPR2; MIM 108961). Also see NPR3 (MIM 108962), which encodes a protein with only the ligand-binding transmembrane and 37-amino acid cytoplasmic domains. NPR1 is a membrane-bound guanylate cyclase that serves as the receptor for both atrial and brain natriuretic peptides (ANP (MIM 108780) and BNP (MIM 600295), respectively).[supplied by OMIM, May 2009]
Transcription factors with Perturb-seq knockdown data for NPR1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NPR1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NPR1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr1:153,494,904–153,495,543 | 183.6 kb | Distal (>10kb) Multiome | 290 | |
| chr1:153,532,833–153,533,594 | 145.5 kb | Distal (>10kb) Multiome | 493 | |
| chr1:153,538,198–153,538,657 | 140.2 kb | Distal (>10kb) Multiome | 338 | |
| chr1:153,544,844–153,545,543 | 133.5 kb | Distal (>10kb) Multiome | 575 | |
| chr1:153,568,278–153,569,058 | 110.0 kb | Distal (>10kb) Multiome | 641 | |
| chr1:153,612,574–153,613,563 | 65.6 kb | Distal (>10kb) Multiome | 388 | |
| chr1:153,626,535–153,627,974 | 51.1 kb | Distal (>10kb) Multiome | 697 | |
| chr1:153,633,575–153,634,639 | 44.6 kb | Distal (>10kb) Multiome | 998 | |
| chr1:153,658,331–153,659,230 | 19.9 kb | Distal (>10kb) Multiome | 746 | |
| chr1:153,670,709–153,671,992 | 7.5 kb | Proximal (<10kb) Multiome | 884 | |
| chr1:153,677,768–153,677,972 | 714 bp | At TSS | 282 | |
| chr1:153,679,083–153,679,923 | 396 bp | At TSS | 349 | |
| chr1:153,679,997–153,680,373 | 1.3 kb | Proximal (<10kb) | 61 | |
| chr1:153,697,776–153,698,654 | 19.7 kb | Distal (>10kb) Multiome | 313 | |
| chr1:153,727,492–153,728,827 | 49.2 kb | Distal (>10kb) Multiome | 702 | |
| chr1:153,736,782–153,737,426 | 58.4 kb | Distal (>10kb) Multiome | 10 | |
| chr1:153,745,487–153,745,959 | 67.0 kb | Distal (>10kb) Multiome HiCAR | 55 | |
| chr1:153,774,962–153,776,698 | 96.5 kb | Distal (>10kb) Multiome HiCAR | 671 | |
| chr1:153,783,341–153,784,300 | 105.0 kb | Distal (>10kb) Multiome | 794 | |
| chr1:153,922,213–153,923,779 | 244.4 kb | Distal (>10kb) Multiome | 856 | |
| chr1:153,945,717–153,947,118 | 268.0 kb | Distal (>10kb) Multiome | 866 | |
| chr1:153,957,828–153,959,103 | 280.0 kb | Distal (>10kb) Multiome | 912 | |
| chr1:153,963,107–153,964,407 | 285.0 kb | Distal (>10kb) Multiome | 798 | |
| chr1:153,967,147–153,968,324 | 289.0 kb | Distal (>10kb) Multiome | 986 | |
| chr1:153,977,057–153,978,034 | 298.9 kb | Distal (>10kb) Multiome | 853 |
Genomic view of the NPR1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.