NDUFB2
NADH:ubiquinone oxidoreductase subunit B2 | AGGG, CI-AGGG

The protein encoded by this gene is a subunit of the multisubunit NADH:ubiquinone oxidoreductase (complex I). Mammalian complex I is composed of 45 different subunits. This protein has NADH dehydrogenase activity and oxidoreductase activity. It plays a important role in transfering electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Hydropathy analysis revealed that this subunit and 4 other subunits have an overall hydrophilic pattern, even though they are found within the hydrophobic protein (HP) fraction of complex I. [provided by RefSeq, Jul 2008]

Member of: DE-1 DE-1.12
Biological processes 14 terms
Expression (TPM)
NDUFB2 — as a Regulated Gene

TFs regulating NDUFB2 0 TFs

Transcription factors with Perturb-seq knockdown data for NDUFB2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NDUFB2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to NDUFB2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NDUFB2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr7:140,397,976–140,398,715 298.2 kb Distal (>10kb) Multiome 696
chr7:140,403,831–140,404,498 292.6 kb Distal (>10kb) Multiome 333
chr7:140,455,562–140,456,050 240.8 kb Distal (>10kb) Multiome 50
chr7:140,478,495–140,480,078 217.2 kb Distal (>10kb) Multiome 869
chr7:140,481,148–140,482,022 215.1 kb Distal (>10kb) Multiome 15
chr7:140,488,120–140,488,789 208.2 kb Distal (>10kb) Multiome 230
chr7:140,517,960–140,518,418 178.5 kb Distal (>10kb) Multiome 472
chr7:140,541,306–140,541,982 154.9 kb Distal (>10kb) Multiome 422
chr7:140,639,882–140,641,732 55.9 kb Distal (>10kb) Multiome 486
chr7:140,672,673–140,674,052 23.7 kb Distal (>10kb) Multiome 648
chr7:140,696,318–140,697,705 146 bp At TSS Multiome 1002
chr7:140,924,039–140,925,334 228.2 kb Distal (>10kb) Multiome 930
chr7:141,014,405–141,015,593 318.4 kb Distal (>10kb) Multiome HiCAR 1023

Genome Browser

Genomic view of the NDUFB2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr7:140,387,976 – 141,025,593
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq