MAP3K9
mitogen-activated protein kinase kinase kinase 9 | MEKK9, PRKE1, MLK1
MAP3K9 — as a Regulated Gene

TFs regulating MAP3K9 0 TFs

Transcription factors with Perturb-seq knockdown data for MAP3K9. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = MAP3K9 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to MAP3K9

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of MAP3K9, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr14:70,600,414–70,601,212 208.7 kb Distal (>10kb) Multiome 519
chr14:70,641,239–70,642,585 167.8 kb Distal (>10kb) Multiome 486
chr14:70,716,516–70,717,866 92.4 kb Distal (>10kb) Multiome 256
chr14:70,753,481–70,754,035 55.8 kb Distal (>10kb) Multiome 262
chr14:70,808,217–70,810,598 201 bp At TSS Multiome 697
chr14:70,816,595–70,816,853 7.1 kb Proximal (<10kb) 19
chr14:70,817,332–70,818,017 8.3 kb Proximal (<10kb) Multiome 483
chr14:70,821,689–70,823,208 13.3 kb Distal (>10kb) Multiome 559
chr14:70,907,022–70,908,784 97.9 kb Distal (>10kb) Multiome 716

Genome Browser

Genomic view of the MAP3K9 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr14:70,590,414 – 70,918,784
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq