This gene belongs to the Ras oncogene family, whose members are related to the transforming genes of mammalian sarcoma retroviruses. The products encoded by these genes function in signal transduction pathways. These proteins can bind GTP and GDP, and they have intrinsic GTPase activity. This protein undergoes a continuous cycle of de- and re-palmitoylation, which regulates its rapid exchange between the plasma membrane and the Golgi apparatus. Mutations in this gene cause Costello syndrome, a disease characterized by increased growth at the prenatal stage, growth deficiency at the postnatal stage, predisposition to tumor formation, cognitive disability, skin and musculoskeletal abnormalities, distinctive facial appearance and cardiovascular abnormalities. Defects in this gene are implicated in a variety of cancers, including bladder cancer, follicular thyroid cancer, and oral squamous cell carcinoma. Multiple transcript variants, which encode different isoforms, have been identified for this gene. [provided by RefSeq, Jul 2008]
Transcription factors with Perturb-seq knockdown data for HRAS. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = HRAS upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of HRAS, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr11:235,864–237,255 | 299.1 kb | Distal (>10kb) Multiome | 874 | |
| chr11:288,466–289,320 | 246.5 kb | Distal (>10kb) Multiome | 400 | |
| chr11:313,383–314,476 | 221.7 kb | Distal (>10kb) Multiome | 421 | |
| chr11:316,978–318,064 | 218.4 kb | Distal (>10kb) Multiome | 100 | |
| chr11:333,722–334,610 | 201.3 kb | Distal (>10kb) Multiome | 238 | |
| chr11:355,654–356,479 | 179.4 kb | Distal (>10kb) Multiome | 894 | |
| chr11:370,037–370,556 | 165.4 kb | Distal (>10kb) Multiome | 205 | |
| chr11:406,008–408,661 | 128.3 kb | Distal (>10kb) Multiome | 587 | |
| chr11:416,764–417,613 | 118.2 kb | Distal (>10kb) Multiome | 431 | |
| chr11:447,919–448,752 | 87.3 kb | Distal (>10kb) Multiome | 808 | |
| chr11:449,838–451,194 | 85.3 kb | Distal (>10kb) Multiome | 836 | |
| chr11:506,153–507,989 | 28.4 kb | Distal (>10kb) Multiome | 977 | |
| chr11:534,525–536,399 | 81 bp | At TSS Multiome | 673 | |
| chr11:536,654–537,918 | 1.9 kb | Proximal (<10kb) Multiome | 558 | |
| chr11:554,380–556,321 | 19.6 kb | Distal (>10kb) Multiome | 460 | |
| chr11:559,830–562,079 | 25.3 kb | Distal (>10kb) Multiome | 791 | |
| chr11:567,850–569,533 | 33.0 kb | Distal (>10kb) Multiome | 672 | |
| chr11:574,830–576,748 | 40.6 kb | Distal (>10kb) Multiome | 793 | |
| chr11:613,334–614,059 | 78.1 kb | Distal (>10kb) Multiome | 215 | |
| chr11:615,262–616,320 | 80.3 kb | Distal (>10kb) Multiome | 443 | |
| chr11:636,786–637,700 | 101.6 kb | Distal (>10kb) Multiome | 161 | |
| chr11:693,835–696,330 | 159.9 kb | Distal (>10kb) Multiome | 873 | |
| chr11:705,737–706,270 | 170.5 kb | Distal (>10kb) Multiome | 361 | |
| chr11:720,619–721,074 | 185.3 kb | Distal (>10kb) Multiome | 156 | |
| chr11:727,901–728,499 | 192.6 kb | Distal (>10kb) Multiome | 686 | |
| chr11:746,704–748,069 | 211.7 kb | Distal (>10kb) Multiome | 755 | |
| chr11:762,582–763,602 | 227.7 kb | Distal (>10kb) Multiome | 326 | |
| chr11:776,216–778,328 | 241.8 kb | Distal (>10kb) Multiome | 770 | |
| chr11:783,385–783,909 | 248.1 kb | Distal (>10kb) Multiome | 278 | |
| chr11:797,112–798,675 | 262.7 kb | Distal (>10kb) Multiome | 697 | |
| chr11:804,241–805,812 | 269.7 kb | Distal (>10kb) Multiome | 725 | |
| chr11:808,894–810,402 | 274.2 kb | Distal (>10kb) Multiome | 976 | |
| chr11:818,369–820,592 | 284.0 kb | Distal (>10kb) Multiome | 749 | |
| chr11:826,980–828,116 | 292.0 kb | Distal (>10kb) Multiome | 662 | |
| chr11:828,933–831,262 | 294.8 kb | Distal (>10kb) Multiome | 491 | |
| chr11:832,323–833,565 | 297.3 kb | Distal (>10kb) Multiome | 562 |
Genomic view of the HRAS locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.