Enables GTPase activity and translation release factor activity. Involved in regulation of translational termination and translational termination. Acts upstream of or within protein methylation. Part of translation release factor complex. Is active in cytosolic ribosome. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for GSPT1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = GSPT1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of GSPT1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr16:11,667,937–11,668,794 | 247.6 kb | Distal (>10kb) Multiome | 540 | |
| chr16:11,742,120–11,743,349 | 173.1 kb | Distal (>10kb) Multiome | 1040 | |
| chr16:11,796,876–11,797,981 | 118.6 kb | Distal (>10kb) Multiome | 986 | |
| chr16:11,851,115–11,852,070 | 64.4 kb | Distal (>10kb) Multiome | 978 | |
| chr16:11,876,086–11,876,741 | 39.6 kb | Distal (>10kb) Multiome | 80 | |
| chr16:11,915,000–11,916,719 | 146 bp | At TSS Multiome | 1130 | |
| chr16:11,976,325–11,977,203 | 60.7 kb | Distal (>10kb) Multiome | 857 |
Genomic view of the GSPT1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.