GPR89A
golgi pH regulator A | GPHR, UNQ192, GPR89A
GPR89A — as a Regulated Gene

TFs regulating GPR89A 0 TFs

Transcription factors with Perturb-seq knockdown data for GPR89A. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = GPR89A upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to GPR89A

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of GPR89A, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr1:145,425,109–145,426,041 182.3 kb Distal (>10kb) Multiome 406
chr1:145,465,272–145,465,855 142.4 kb Distal (>10kb) Multiome 578
chr1:145,601,589–145,601,937 6.0 kb Proximal (<10kb) 5
chr1:145,607,803–145,608,364 28 bp At TSS Multiome 205
chr1:145,707,296–145,708,738 100.2 kb Distal (>10kb) Multiome 511
chr1:145,720,881–145,721,650 113.3 kb Distal (>10kb) Multiome 548
chr1:145,823,605–145,824,539 216.1 kb Distal (>10kb) Multiome 899
chr1:145,845,315–145,846,128 237.7 kb Distal (>10kb) Multiome 750
chr1:145,858,348–145,860,193 252.0 kb Distal (>10kb) Multiome 828
chr1:145,885,653–145,886,460 278.1 kb Distal (>10kb) Multiome 327
chr1:145,891,718–145,892,684 284.1 kb Distal (>10kb) Multiome 738

Genome Browser

Genomic view of the GPR89A locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr1:145,415,109 – 145,902,684
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq