FNTB
farnesyltransferase, CAAX box, subunit beta | FPTB
FNTB — as a Regulated Gene

TFs regulating FNTB 0 TFs

Transcription factors with Perturb-seq knockdown data for FNTB. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = FNTB upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to FNTB

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of FNTB, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr14:64,688,830–64,689,973 297.7 kb Distal (>10kb) Multiome 173
chr14:64,702,676–64,705,752 282.5 kb Distal (>10kb) Multiome 771
chr14:64,708,103–64,708,910 278.5 kb Distal (>10kb) Multiome 355
chr14:64,764,629–64,765,271 222.0 kb Distal (>10kb) Multiome 313
chr14:64,823,107–64,823,713 163.5 kb Distal (>10kb) Multiome 316
chr14:64,879,129–64,880,883 106.5 kb Distal (>10kb) Multiome 485
chr14:64,914,197–64,914,885 72.5 kb Distal (>10kb) Multiome 741
chr14:64,971,572–64,972,862 14.6 kb Distal (>10kb) Multiome 360
chr14:64,983,581–64,983,959 2.9 kb Proximal (<10kb) 91
chr14:64,986,666–64,987,558 165 bp At TSS Multiome 890
chr14:65,079,469–65,080,344 93.1 kb Distal (>10kb) Multiome 80
chr14:65,101,709–65,103,353 115.8 kb Distal (>10kb) Multiome 804
chr14:65,187,313–65,188,086 200.7 kb Distal (>10kb) Multiome 124
chr14:65,212,664–65,213,594 226.3 kb Distal (>10kb) Multiome 50
chr14:65,226,838–65,227,673 240.4 kb Distal (>10kb) Multiome 588
chr14:65,255,144–65,256,610 268.9 kb Distal (>10kb) Multiome 499
chr14:65,281,802–65,282,455 295.3 kb Distal (>10kb) Multiome 179

Genome Browser

Genomic view of the FNTB locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr14:64,678,830 – 65,292,455
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq