DRG1
developmentally regulated GTP binding protein 1 | NEDD3
DRG1 — as a Regulated Gene

TFs regulating DRG1 0 TFs

Transcription factors with Perturb-seq knockdown data for DRG1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DRG1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DRG1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DRG1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr22:31,104,824–31,105,447 294.5 kb Distal (>10kb) Multiome 187
chr22:31,107,269–31,107,915 291.9 kb Distal (>10kb) Multiome 627
chr22:31,127,262–31,127,766 272.1 kb Distal (>10kb) Multiome 74
chr22:31,140,179–31,140,721 259.1 kb Distal (>10kb) Multiome 244
chr22:31,160,052–31,160,698 239.4 kb Distal (>10kb) Multiome 709
chr22:31,211,835–31,212,727 187.4 kb Distal (>10kb) Multiome 769
chr22:31,290,525–31,291,372 108.8 kb Distal (>10kb) Multiome 818
chr22:31,345,143–31,347,910 53.5 kb Distal (>10kb) Multiome 954
chr22:31,362,564–31,363,231 36.8 kb Distal (>10kb) Multiome 164
chr22:31,399,166–31,400,036 111 bp At TSS Multiome 913
chr22:31,489,111–31,490,354 90.3 kb Distal (>10kb) Multiome 819
chr22:31,496,060–31,496,942 96.9 kb Distal (>10kb) Multiome 769
chr22:31,630,284–31,631,283 231.2 kb Distal (>10kb) Multiome 643
chr22:31,661,894–31,662,649 262.6 kb Distal (>10kb) Multiome 791
chr22:31,676,686–31,677,164 277.3 kb Distal (>10kb) Multiome 294

Genome Browser

Genomic view of the DRG1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr22:31,094,824 – 31,687,164
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq