Enables protein serine/threonine kinase activity. Predicted to be involved in endocytosis; positive regulation of canonical Wnt signaling pathway; and signal transduction. Located in membrane. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for CSNK1G2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = CSNK1G2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of CSNK1G2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr19:1,651,519–1,653,514 | 288.2 kb | Distal (>10kb) Multiome | 909 | |
| chr19:1,725,307–1,726,101 | 215.4 kb | Distal (>10kb) Multiome | 455 | |
| chr19:1,811,638–1,813,347 | 128.6 kb | Distal (>10kb) Multiome | 782 | |
| chr19:1,826,853–1,827,379 | 113.9 kb | Distal (>10kb) Multiome | 193 | |
| chr19:1,848,048–1,848,953 | 92.5 kb | Distal (>10kb) Multiome | 819 | |
| chr19:1,851,701–1,852,216 | 89.2 kb | Distal (>10kb) Multiome | 115 | |
| chr19:1,855,082–1,856,620 | 85.7 kb | Distal (>10kb) Multiome | 476 | |
| chr19:1,861,439–1,865,723 | 77.2 kb | Distal (>10kb) Multiome | 891 | |
| chr19:1,875,645–1,876,693 | 64.9 kb | Distal (>10kb) Multiome | 887 | |
| chr19:1,885,058–1,885,861 | 55.6 kb | Distal (>10kb) Multiome | 495 | |
| chr19:1,904,556–1,906,084 | 35.7 kb | Distal (>10kb) Multiome | 907 | |
| chr19:1,940,240–1,942,987 | 181 bp | At TSS Multiome | 901 | |
| chr19:2,034,637–2,035,967 | 93.9 kb | Distal (>10kb) Multiome | 368 | |
| chr19:2,041,744–2,042,811 | 101.0 kb | Distal (>10kb) Multiome | 586 | |
| chr19:2,049,171–2,052,365 | 110.1 kb | Distal (>10kb) Multiome | 977 | |
| chr19:2,060,703–2,062,560 | 120.4 kb | Distal (>10kb) Multiome | 913 | |
| chr19:2,095,898–2,097,954 | 155.5 kb | Distal (>10kb) Multiome | 945 | |
| chr19:2,150,726–2,152,200 | 210.6 kb | Distal (>10kb) Multiome | 761 | |
| chr19:2,163,561–2,164,587 | 222.7 kb | Distal (>10kb) Multiome | 750 | |
| chr19:2,235,315–2,237,253 | 295.4 kb | Distal (>10kb) Multiome | 1119 |
Genomic view of the CSNK1G2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.