chr17 : 40,638,473 40,638,606
133 bp 8 TFs 2 linked genes
This 133 bp open chromatin element is linked to SMARCE1 and ENSG00000278834 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SMARCE1 9.2 kb Proximal Proximity
ENSG00000278834 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:40,633,473 – 40,643,606
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 133 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 133 bp overlap
ChIP DE DE-FOXA2-2 133 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 133 bp overlap
ChIP DE DE-GATA4-2 133 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 133 bp overlap
ChIP DE DE-GATA6-2 133 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 133 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 109 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 133 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 133 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 133 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 133 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 73 bp overlap
ChIP HepG2 ENCFF939HTZ 74 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 133 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 133 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 133 bp overlap
U2AF2 2 datasets
ChIP Hep-G2 GSE120104.U2AF2.Hep-G2 133 bp overlap
ChIP Hep-G2 ENCSR991ADX.U2AF2.Hep-G2 124 bp overlap