chr13 : 114,278,684 114,278,943
259 bp 12 TFs 1 linked gene
This 259 bp open chromatin element is linked to UPF3A and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
UPF3A 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:114,273,684 – 114,283,943
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 157 bp overlap
ChIP DE DE-FOXA2-2 90 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 259 bp overlap
ChIP DE DE-GATA4-2 259 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 216 bp overlap
ChIP DE DE-GATA6-2 214 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 229 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 259 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 223 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 155 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 170 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 142 bp overlap
ZKSCAN8 1 dataset
ChIP K562 ENCFF387ETI 259 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 259 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 53 bp overlap