chr13 : 104,580,512 104,581,099
587 bp 14 TFs 0 linked genes
This 587 bp open chromatin element has no linked target genes and is bound by 14 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:104,575,512 – 104,586,099
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 153 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 120 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 383 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 469 bp overlap
ChIP DE DE-FOXA2-2 495 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 587 bp overlap
ChIP DE DE-GATA4-2 587 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 587 bp overlap
ChIP DE DE-GATA6-2 587 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 567 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 587 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 384 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 587 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 587 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 550 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 587 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 219 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 143 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 418 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 454 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 417 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 470 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 152 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 481 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 286 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 386 bp overlap
ZNF680 1 dataset
ChIP HEK293 GSE76494.ZNF680.HEK293 320 bp overlap