chr13 : 96,170,099 96,170,699
600 bp 12 TFs 0 linked genes
This 600 bp open chromatin element has no linked target genes and is bound by 12 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:96,165,099 – 96,175,699
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 173 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 202 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 168 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 388 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 205 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 225 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 448 bp overlap
ChIP DE DE-FOXA2-2 372 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 516 bp overlap
ChIP DE DE-GATA4-2 600 bp overlap
ChIP foregut GSE117136.GATA4.foregut 363 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 490 bp overlap
ChIP DE DE-GATA6-2 591 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 600 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 410 bp overlap
ChIP foregut GSE117136.GATA6.foregut 451 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 390 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 340 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 253 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 346 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 356 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 178 bp overlap