chr1 : 209,603,929 209,604,402
473 bp 12 TFs 0 linked genes
This 473 bp open chromatin element has no linked target genes and is bound by 12 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:209,598,929 – 209,609,402
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 267 bp overlap
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 337 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 251 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 375 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 346 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 473 bp overlap
ChIP DE DE-GATA4-2 473 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 466 bp overlap
ChIP DE DE-GATA6-2 473 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 266 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 295 bp overlap
JUN 1 dataset
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 57 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 125 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 330 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 245 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 163 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 169 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 303 bp overlap