chr12 : 25,640,099 25,640,300
201 bp 7 TFs 1 linked gene
This 201 bp open chromatin element is linked to LMNTD1 and is bound by 7 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LMNTD1 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:25,635,099 – 25,645,300
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 201 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 201 bp overlap
ChIP DE DE-GATA4-2 201 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 201 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 128 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 201 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 201 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 159 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 171 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 201 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 182 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 201 bp overlap