chr12 : 10,719,131 10,719,274
143 bp 13 TFs 1 linked gene
This 143 bp open chromatin element is linked to YBX3 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
YBX3 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:10,714,131 – 10,724,274
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 143 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 143 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 129 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 143 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 73 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 143 bp overlap
GATA1 2 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 107 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 74 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 143 bp overlap
ChIP DE DE-GATA4-2 143 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 143 bp overlap
ChIP foregut GSE117136.GATA4.foregut 143 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 143 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 143 bp overlap
ChIP DE DE-GATA6-2 143 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 143 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 143 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 93 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 143 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 115 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 143 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 143 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 143 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF467WJF 59 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 122 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 143 bp overlap