chr11 : 27,801,035 27,801,462
427 bp 5 TFs 1 linked gene
This 427 bp open chromatin element is linked to CBX3P1 and is bound by EOMES, FOXA2, GATA4, GATA6, and SMAD2_3.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CBX3P1 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:27,796,035 – 27,806,462
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 326 bp overlap
ChIP DE DE-FOXA2-2 300 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 421 bp overlap
ChIP DE DE-GATA4-2 427 bp overlap
GATA6 8 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 404 bp overlap
ChIP DE DE-GATA6-2 427 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 226 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 327 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 291 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 376 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 384 bp overlap