chr11:6,620,815–6,621,422

chr11 : 6,620,815 – 6,621,422

607 bp 10 TFs 5 linked genes

This 607 bp open chromatin element is linked to 5 target genes and is bound by 10 transcription factors.

Linked Genes

5 genes

Gene	Expression	Dist. to TSS	Distance	Link type
TPP1		1.4 kb	Proximal	Proximity
ENSG00000255680		2.0 kb	Proximal	Proximity
ENSG00000285338		4.2 kb	Proximal	Proximity
TAF10		8.6 kb	Proximal	Proximity
ENSG00000255410		9.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

10 transcription factors

CEBPB 1 dataset

ChIP WA01 ENCSR000EBV.CEBPB.WA01 132 bp overlap

FOXA1 1 dataset

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 383 bp overlap

ChIP DE DE-FOXA2-2 352 bp overlap

GATA6 1 dataset

ChIP DE DE-GATA6-2 289 bp overlap

NANOG 1 dataset

ChIP hESC GSE18292.NANOG.hESC 143 bp overlap

RFX5 2 datasets

ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 58 bp overlap

ChIP WA01 ENCSR000ECF.RFX5.WA01 77 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 334 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 305 bp overlap

ZNF398 1 dataset

ChIP H9 GSE133630.ZNF398.H9 154 bp overlap

ZNF479 1 dataset

ChIP HEK293T GSE78099.ZNF479.HEK293T 280 bp overlap