chr10 : 89,455,712 89,456,118
406 bp 12 TFs 1 linked gene
This 406 bp open chromatin element is linked to SLC16A12-AS1 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC16A12-AS1 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:89,450,712 – 89,461,118
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
CTCF 5 datasets
ChIP HeLa GSE126990.CTCF.HeLa 82 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 82 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 110 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 80 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 70 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 271 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 58 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 155 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 406 bp overlap
ChIP DE DE-FOXA2-2 390 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 246 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 122 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 352 bp overlap
ChIP DE DE-GATA4-2 406 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 298 bp overlap
ChIP DE DE-GATA6-2 364 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 220 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 194 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 292 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 199 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 159 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 60 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 67 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 54 bp overlap