chr9 : 100,057,030 100,057,205
175 bp 9 TFs 0 linked genes
This 175 bp open chromatin element has no linked target genes and is bound by 9 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:100,052,030 – 100,062,205
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 53 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 175 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 77 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 62 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 57 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 175 bp overlap
ChIP DE DE-FOXA2-2 175 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 175 bp overlap
ChIP DE DE-GATA4-2 175 bp overlap
ChIP foregut GSE117136.GATA4.foregut 175 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 175 bp overlap
GATA6 8 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 155 bp overlap
ChIP DE DE-GATA6-1 175 bp overlap
ChIP DE DE-GATA6-2 175 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 175 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 175 bp overlap
ChIP foregut GSE117136.GATA6.foregut 175 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 175 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 175 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 132 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 175 bp overlap
SMARCE1 1 dataset
ChIP HMLE-Twist-ER_125nM_4OHT GSE96933.SMARCE1.HMLE-Twist-ER_125nM_4OHT 115 bp overlap