chr1 : 178,042,486 178,043,383
897 bp 8 TFs 3 linked genes
This 897 bp open chromatin element is linked to CRYZL2P-SEC16B, CRYZL2P, and RASAL2 and is bound by 8 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
CRYZL2P-SEC16B 4.5 kb Proximal Proximity
CRYZL2P 4.5 kb Proximal Proximity
RASAL2 298.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:178,037,486 – 178,048,383
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 509 bp overlap
ChIP DE DE-FOXA2-2 536 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 567 bp overlap
ChIP DE DE-GATA4-2 658 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 659 bp overlap
ChIP DE DE-GATA6-2 814 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 615 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 678 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 692 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 534 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 268 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 334 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 480 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 484 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 372 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 506 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 294 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 379 bp overlap