chr9 : 25,674,551 25,675,222
671 bp 6 TFs 1 linked gene
This 671 bp open chromatin element is linked to TUSC1 and is bound by 6 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TUSC1 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:25,669,551 – 25,680,222
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
6 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 671 bp overlap
ChIP DE DE-FOXA2-2 498 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 671 bp overlap
ChIP DE DE-GATA4-2 671 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 477 bp overlap
ChIP DE DE-GATA6-2 611 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 541 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 474 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 412 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 388 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 402 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 381 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 164 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 475 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 399 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 355 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 250 bp overlap