chr9 : 12,416,731 12,417,160
429 bp 9 TFs 0 linked genes
This 429 bp open chromatin element has no linked target genes and is bound by 9 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:12,411,731 – 12,422,160
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 429 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 98 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 300 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 415 bp overlap
FOXA1 6 datasets
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 128 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 74 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 179 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 199 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 159 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 176 bp overlap
GRHL2 5 datasets
ChIP HBE GSE46194.GRHL2.HBE 151 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 210 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 246 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 210 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 204 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 182 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 342 bp overlap