chr9 : 9,522,807 9,522,968
161 bp 11 TFs 0 linked genes
This 161 bp open chromatin element has no linked target genes and is bound by 11 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:9,517,807 – 9,527,968
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 161 bp overlap
CTCF 4 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 126 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 161 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 81 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 136 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 54 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 161 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 84 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 56 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 161 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 161 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 161 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 115 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 161 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 161 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 161 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 84 bp overlap
SMARCA4 2 datasets
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 137 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 161 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 155 bp overlap
SMARCC1 2 datasets
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 161 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 129 bp overlap