chr6 : 158,994,524 158,994,660
136 bp 5 TFs 2 linked genes
This 136 bp open chromatin element is linked to RSPH3 and TAGAP-AS1 and is bound by BRD4, DDX5, HMGA1, MYOD1, and TCF4.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RSPH3 5.1 kb Proximal Proximity
TAGAP-AS1 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:158,989,524 – 158,999,660
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 125 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 136 bp overlap
HMGA1 1 dataset
ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 136 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 136 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 112 bp overlap