chr6 : 132,825,197 132,825,946
749 bp 11 TFs 2 linked genes
This 749 bp open chromatin element is linked to SNORA33 and SNORD101 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SNORA33 8.0 kb Proximal Proximity
SNORD101 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:132,820,197 – 132,830,946
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 597 bp overlap
BRD4 1 dataset
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 175 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 127 bp overlap
CTCF 9 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 200 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 137 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 206 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 245 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 55 bp overlap
ChIP PC-9 ENCFF539ULB 61 bp overlap
ChIP brain ENCFF163BBN 98 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 68 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 212 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 281 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 149 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 210 bp overlap
SMARCA4 3 datasets
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 357 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 373 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 561 bp overlap
SMARCC1 3 datasets
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 219 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 422 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 408 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 322 bp overlap