chr6 : 83,200,602 83,200,767
165 bp 3 TFs 2 linked genes
This 165 bp open chromatin element is linked to RWDD2A and PGM3 and is bound by GATA6, JUN, and SMAD2-3.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RWDD2A 7.2 kb Proximal Proximity
PGM3 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:83,195,602 – 83,205,767
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
3 transcription factors
Source
Cell type
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 165 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 165 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 104 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 152 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 165 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 131 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 165 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 165 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 158 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 152 bp overlap