chr1 : 96,501,530 96,502,061
531 bp 7 TFs 0 linked genes
This 531 bp open chromatin element has no linked target genes and is bound by 7 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:96,496,530 – 96,507,061
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 184 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 295 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 255 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 352 bp overlap
ChIP DE DE-GATA6-2 309 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 449 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 411 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 531 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 483 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 57 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 371 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 242 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap