chr5 : 96,944,808 96,945,217
409 bp 14 TFs 2 linked genes
This 409 bp open chromatin element is linked to LNPEP and ENSG00000247121 and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LNPEP 8.7 kb Proximal Proximity
ENSG00000247121 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:96,939,808 – 96,950,217
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 247 bp overlap
ChIP K562 ENCFF673OEZ 291 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF093OYK 409 bp overlap
ChIP BLaER1 ENCFF274GAT 175 bp overlap
ChIP BLaER1 ENCFF460KDD 253 bp overlap
ChIP BLaER1 ENCFF844FIP 209 bp overlap
ChIP BLaER1 ENCFF896HSY 104 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 264 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 136 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 409 bp overlap
ChIP DE DE-GATA4-2 409 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 409 bp overlap
ChIP DE DE-GATA6-2 409 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 400 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 409 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 409 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 398 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 403 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 286 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF412KAE 281 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 409 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 355 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 377 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 409 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 409 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 362 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 409 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 154 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCFF839FUF 106 bp overlap