chr5 : 88,258,737 88,259,157
420 bp 6 TFs 2 linked genes
This 420 bp open chromatin element is linked to TMEM161B and TMEM161B-DT and is bound by 6 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TMEM161B 9.7 kb Proximal Proximity
TMEM161B-DT 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:88,253,737 – 88,264,157
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
6 transcription factors
Source
Cell type
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 255 bp overlap
ChIP DE DE-FOXA2-1 420 bp overlap
ChIP DE DE-FOXA2-2 420 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 420 bp overlap
ChIP DE DE-GATA4-2 420 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 420 bp overlap
ChIP foregut GSE117136.GATA4.foregut 420 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 420 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 341 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 168 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 154 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 93 bp overlap
ChIP DE DE-GATA6-1 420 bp overlap
ChIP DE DE-GATA6-2 420 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 359 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 420 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 420 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 420 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 334 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 420 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 363 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 252 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 230 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 186 bp overlap