chr1 : 89,020,122 – 89,020,509
387 bp 8 TFs 1 linked gene
This 387 bp open chromatin element is linked to Y_RNA and is bound by 8 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
Y_RNA at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:89,015,122 – 89,025,509
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 91 bp overlap
GATA1 1 dataset
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 203 bp overlap
GATA2 2 datasets
ChIP TF1 GSE73207.GATA2.TF1 220 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 206 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 284 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 257 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 340 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 256 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 141 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 102 bp overlap
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