chr5 : 5,077,332 5,077,540
208 bp 8 TFs 1 linked gene
This 208 bp open chromatin element is linked to LINC02121 and is bound by 8 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02121 770 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:5,072,332 – 5,082,540
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
EZH2 2 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 97 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 176 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 208 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 208 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 208 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 208 bp overlap
ChIP hESC GSE18292.NANOG.hESC 106 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 208 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 103 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 145 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 104 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 97 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 208 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 98 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 208 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 172 bp overlap
SRF 1 dataset
Motif DE_12h DE_12h-SRF_MA0083.3 16 bp overlap