chr4 : 180,497,478 180,497,993
515 bp 13 TFs 0 linked genes
This 515 bp open chromatin element has no linked target genes and is bound by 13 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:180,492,478 – 180,502,993
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 199 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 322 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 495 bp overlap
ESR1 1 dataset
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 150 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 268 bp overlap
ChIP DE DE-FOXA2-1 484 bp overlap
ChIP DE DE-FOXA2-2 515 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 515 bp overlap
ChIP DE DE-GATA4-2 515 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 271 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 320 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 457 bp overlap
ChIP DE DE-GATA6-2 515 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 466 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 515 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 325 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 291 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 331 bp overlap
HSF1 2 datasets
ChIP MO91 GSE45852.HSF1.MO91 176 bp overlap
ChIP NCI-H441 GSE38901.HSF1.NCI-H441 153 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 281 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 439 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 515 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 403 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 388 bp overlap