chr4 : 112,641,078 112,641,590
512 bp 5 TFs 7 linked genes
This 512 bp open chromatin element is linked to 7 target genes and is bound by Cebpa, GATA4, GATA6, MAFK, and NUTM1.
Linked Genes
7 genes
Gene Expression Dist. to TSS Distance Link type
LARP7 4.0 kb Proximal Proximity
ZGRF1 4.2 kb Proximal Proximity
MIR302D 6.5 kb Proximal Proximity
MIR302A 6.7 kb Proximal Proximity
MIR302C 6.8 kb Proximal Proximity
MIR302B 7.0 kb Proximal Proximity
MIR302CHG 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,636,078 – 112,646,590
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 356 bp overlap
ChIP BLaER1 ENCFF274GAT 266 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 157 bp overlap
ChIP DE DE-GATA4-2 220 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 153 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 89 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 78 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 127 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 62 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 65 bp overlap