chr4 : 9,696,072 9,696,252
180 bp 5 TFs 1 linked gene
This 180 bp open chromatin element is linked to ENSG00000287117 and is bound by CTCF, RAD21, STAG1, TRIM22, and ZNF121.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287117 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:9,691,072 – 9,701,252
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
CTCF 278 datasets
ChIP 22Rv1 ENCFF466OXN 180 bp overlap
ChIP A549 ENCFF034FVO 180 bp overlap
ChIP A549 ENCFF182TCQ 180 bp overlap
ChIP A549 ENCFF669BWC 180 bp overlap
ChIP AG10803 ENCFF549AQK 180 bp overlap
ChIP B cell ENCFF506FKC 180 bp overlap
ChIP BJ ENCFF434HEC 180 bp overlap
ChIP C4-2B ENCFF821XVN 180 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 180 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 180 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 180 bp overlap
ChIP Caco-2 ENCFF934QYS 180 bp overlap
ChIP Calu3 ENCFF526MDS 180 bp overlap
ChIP D721Med ENCFF513FYD 180 bp overlap
ChIP DND-41 ENCFF913MRA 139 bp overlap
ChIP GM06990 ENCFF471OQT 180 bp overlap
ChIP GM10248 ENCFF083HVS 135 bp overlap
ChIP GM10266 ENCFF241YYF 154 bp overlap
ChIP GM12864 ENCFF357DQE 180 bp overlap
ChIP GM12865 ENCFF067GFI 180 bp overlap
ChIP GM12872 ENCFF697BYI 180 bp overlap
ChIP GM12873 ENCFF711LOS 180 bp overlap
ChIP GM12874 ENCFF942MTD 180 bp overlap
ChIP GM12875 ENCFF081UCQ 180 bp overlap
ChIP GM12878 ENCFF485TGR 180 bp overlap
ChIP GM13976 ENCFF896BYT 160 bp overlap
ChIP GM13977 ENCFF528ESQ 168 bp overlap
ChIP GM23338 ENCFF531QOI 180 bp overlap
ChIP GM23338 ENCFF772DML 169 bp overlap
ChIP H1 ENCFF230QSV 152 bp overlap
ChIP H1 ENCFF414GZI 180 bp overlap
ChIP H1 ENCFF764RHO 180 bp overlap
ChIP H54 ENCFF255TVO 180 bp overlap
ChIP H9 ENCFF152GTF 180 bp overlap
ChIP HCT116 ENCFF003KHP 130 bp overlap
ChIP HCT116 ENCFF209YMI 180 bp overlap
ChIP HCT116 ENCFF373YMA 180 bp overlap
ChIP HEK293 ENCFF498RMM 180 bp overlap
ChIP HEK293 ENCFF821TIC 180 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 120 bp overlap
ChIP HFFc6 ENCFF005CJI 180 bp overlap
ChIP HeLa-S3 ENCFF565UFR 152 bp overlap
ChIP HeLa-S3 ENCFF626XQK 180 bp overlap
ChIP HepG2 ENCFF127KUP 180 bp overlap
ChIP HepG2 ENCFF348BUL 180 bp overlap
ChIP HepG2 ENCFF757EKU 180 bp overlap
ChIP LNCAP ENCFF223HIG 180 bp overlap
ChIP LNCAP ENCFF700QXT 180 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 174 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 153 bp overlap
ChIP Loucy ENCFF359TVQ 180 bp overlap
ChIP MCF 10A ENCFF988BGF 180 bp overlap
ChIP MCF-7 ENCFF139NQI 180 bp overlap
ChIP MCF-7 ENCFF162GNE 180 bp overlap
ChIP MCF-7 ENCFF210JUZ 180 bp overlap
ChIP MCF-7 ENCFF414SZG 180 bp overlap
ChIP MCF-7 ENCFF494VXA 180 bp overlap
ChIP MCF-7 ENCFF844STM 164 bp overlap
ChIP MCF-7 ENCFF954TUV 180 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 124 bp overlap
ChIP MM.1S ENCFF869JMQ 136 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 126 bp overlap
ChIP NB4 ENCFF155DNY 180 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 180 bp overlap
ChIP PC-3 ENCFF487TUI 180 bp overlap
ChIP PC-9 ENCFF539ULB 180 bp overlap
ChIP Panc1 ENCFF056JQX 180 bp overlap
ChIP Peyer's patch ENCFF701KWW 139 bp overlap
ChIP Peyer's patch ENCFF742AQK 180 bp overlap
ChIP Peyer's patch ENCFF746TCR 180 bp overlap
ChIP Peyer's patch ENCFF828IDE 157 bp overlap
ChIP RWPE1 ENCFF200GQF 180 bp overlap
ChIP RWPE2 ENCFF911IEE 180 bp overlap
ChIP RWPE2 ENCFF911IEE 180 bp overlap
ChIP SK-N-SH ENCFF731NJX 180 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 105 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 180 bp overlap
ChIP VCaP ENCFF858YQT 180 bp overlap
ChIP VCaP ENCFF858YQT 180 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 180 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 129 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 180 bp overlap
ChIP adrenal gland ENCFF257AUK 116 bp overlap
ChIP adrenal gland ENCFF282ZUL 180 bp overlap
ChIP adrenal gland ENCFF596QXB 180 bp overlap
ChIP adrenal gland ENCFF678WUB 178 bp overlap
ChIP adrenal gland ENCFF723HUU 180 bp overlap
ChIP adrenal gland ENCFF886WNR 180 bp overlap
ChIP ascending aorta ENCFF138DXQ 180 bp overlap
ChIP ascending aorta ENCFF451CCT 180 bp overlap
ChIP body of pancreas ENCFF021LNP 180 bp overlap
ChIP body of pancreas ENCFF128ALM 132 bp overlap
ChIP body of pancreas ENCFF269EDN 180 bp overlap
ChIP body of pancreas ENCFF438KTE 180 bp overlap
ChIP body of pancreas ENCFF756FGB 180 bp overlap
ChIP body of pancreas ENCFF798MEO 180 bp overlap
ChIP body of pancreas ENCFF881RGF 180 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 110 bp overlap
ChIP brain ENCFF067KUH 180 bp overlap
ChIP brain ENCFF099ASU 180 bp overlap
ChIP brain ENCFF163BBN 180 bp overlap
ChIP brain ENCFF685VRG 180 bp overlap
ChIP breast epithelium ENCFF080KNR 180 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 118 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 180 bp overlap
ChIP chondrocyte ENCFF134ORZ 180 bp overlap
ChIP colonic mucosa ENCFF319RUN 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF041CKA 115 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF046GNG 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 174 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF258PHG 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277YTN 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 156 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 175 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF359BHR 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 139 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 167 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 146 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF562MJV 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF604JAV 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 122 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 179 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF641PIN 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 178 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 132 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 168 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF784LWO 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 144 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812JWS 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 155 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF883PFA 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 180 bp overlap
ChIP endodermal cell ENCFF471YCZ 180 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 166 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 180 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 180 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 180 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 180 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 159 bp overlap
ChIP esophagus muscularis mucosa ENCFF544GAS 180 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 180 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 149 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 100 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 180 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 180 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 180 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 180 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 180 bp overlap
ChIP gastrocnemius medialis ENCFF410RHW 180 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 174 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 180 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 146 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 180 bp overlap
ChIP heart left ventricle ENCFF185CKY 156 bp overlap
ChIP heart left ventricle ENCFF244ZHV 169 bp overlap
ChIP heart left ventricle ENCFF354HOQ 180 bp overlap
ChIP heart left ventricle ENCFF413JHX 180 bp overlap
ChIP heart left ventricle ENCFF440XFJ 180 bp overlap
ChIP heart left ventricle ENCFF505HGD 180 bp overlap
ChIP heart left ventricle ENCFF548XHH 129 bp overlap
ChIP heart left ventricle ENCFF663LEI 180 bp overlap
ChIP heart left ventricle ENCFF769GAB 180 bp overlap
ChIP heart left ventricle ENCFF832OXT 180 bp overlap
ChIP heart left ventricle ENCFF842XRG 180 bp overlap
ChIP heart left ventricle ENCFF888ERQ 180 bp overlap
ChIP heart left ventricle ENCFF987PUT 148 bp overlap
ChIP heart right ventricle ENCFF022KFI 180 bp overlap
ChIP heart right ventricle ENCFF027ORH 180 bp overlap
ChIP heart right ventricle ENCFF063GTP 148 bp overlap
ChIP heart right ventricle ENCFF435TKW 180 bp overlap
ChIP heart right ventricle ENCFF577TID 179 bp overlap
ChIP heart right ventricle ENCFF725NNJ 127 bp overlap
ChIP heart right ventricle ENCFF755UXZ 180 bp overlap
ChIP heart right ventricle ENCFF767XJQ 180 bp overlap
ChIP heart right ventricle ENCFF979TCT 180 bp overlap
ChIP hepatocyte ENCFF263BLJ 180 bp overlap
ChIP keratinocyte ENCFF046PBT 180 bp overlap
ChIP keratinocyte ENCFF667ULX 180 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 103 bp overlap
ChIP left lung ENCFF620MAT 180 bp overlap
ChIP left lung ENCFF696EWL 180 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 180 bp overlap
ChIP liver ENCFF895ERR 180 bp overlap
ChIP lower lobe of left lung ENCFF906NCV 180 bp overlap
ChIP lower lobe of right lung ENCFF092XHT 180 bp overlap
ChIP lung ENCFF782RBX 180 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 180 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 180 bp overlap
ChIP myotube ENCFF981UHL 180 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 180 bp overlap
ChIP nephron ENCFF411ACD 180 bp overlap
ChIP nephron ENCFF589HXU 180 bp overlap
ChIP nephron ENCFF972IQB 180 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 180 bp overlap
ChIP neural crest cell ENCFF182LWK 180 bp overlap
ChIP neural progenitor cell ENCFF420RBO 180 bp overlap
ChIP osteocyte ENCFF929FPD 180 bp overlap
ChIP pancreas ENCFF101CZV 168 bp overlap
ChIP pancreas ENCFF245KEE 180 bp overlap
ChIP pancreas ENCFF315CUI 180 bp overlap
ChIP pancreas ENCFF372XNU 180 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 180 bp overlap
ChIP placenta ENCFF029PHY 180 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 180 bp overlap
ChIP prostate gland ENCFF655GBO 180 bp overlap
ChIP prostate gland ENCFF979KAF 124 bp overlap
ChIP psoas muscle ENCFF305ZVF 180 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 180 bp overlap
ChIP right atrium auricular region ENCFF696NTN 180 bp overlap
ChIP right lobe of liver ENCFF011NDG 180 bp overlap
ChIP right lobe of liver ENCFF250KSY 180 bp overlap
ChIP right lobe of liver ENCFF523SCB 145 bp overlap
ChIP right lobe of liver ENCFF956UTA 173 bp overlap
ChIP sigmoid colon ENCFF086DZH 180 bp overlap
ChIP sigmoid colon ENCFF219LPW 180 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 180 bp overlap
ChIP smooth muscle cell ENCFF656FBT 180 bp overlap
ChIP spleen ENCFF065CBS 180 bp overlap
ChIP spleen ENCFF077XIZ 154 bp overlap
ChIP spleen ENCFF326DUY 180 bp overlap
ChIP spleen ENCFF520HPZ 180 bp overlap
ChIP spleen ENCFF653ONC 180 bp overlap
ChIP spleen ENCFF678RAG 178 bp overlap
ChIP spleen ENCFF825QXK 180 bp overlap
ChIP spleen ENCFF954DQD 178 bp overlap
ChIP stomach ENCFF370OWL 180 bp overlap
ChIP stomach ENCFF593FMT 180 bp overlap
ChIP stomach ENCFF719DAZ 180 bp overlap
ChIP stomach ENCFF918GTC 180 bp overlap
ChIP suprapubic skin ENCFF266CTJ 180 bp overlap
ChIP thyroid gland ENCFF163TUI 180 bp overlap
ChIP thyroid gland ENCFF204HWS 180 bp overlap
ChIP thyroid gland ENCFF300RYK 158 bp overlap
ChIP thyroid gland ENCFF631QRY 166 bp overlap
ChIP thyroid gland ENCFF748ICQ 180 bp overlap
ChIP tibial artery ENCFF279CMY 180 bp overlap
ChIP tibial nerve ENCFF755YSO 180 bp overlap
ChIP transverse colon ENCFF046SHF 180 bp overlap
ChIP transverse colon ENCFF077CMZ 180 bp overlap
ChIP transverse colon ENCFF454PBI 180 bp overlap
ChIP transverse colon ENCFF471AZS 180 bp overlap
ChIP transverse colon ENCFF594PFO 163 bp overlap
ChIP transverse colon ENCFF653EYS 131 bp overlap
ChIP transverse colon ENCFF749DPF 180 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 180 bp overlap
ChIP upper lobe of left lung ENCFF108BCY 180 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 170 bp overlap
ChIP upper lobe of left lung ENCFF374MAK 180 bp overlap
ChIP upper lobe of left lung ENCFF654BFF 180 bp overlap
ChIP upper lobe of left lung ENCFF962AIJ 139 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 180 bp overlap
ChIP uterus ENCFF466ZUR 180 bp overlap
ChIP vagina ENCFF057QBG 180 bp overlap
RAD21 14 datasets
ChIP A549 ENCFF047SFC 71 bp overlap
ChIP A549 ENCFF264AHX 172 bp overlap
ChIP H1 ENCFF698EWO 180 bp overlap
ChIP H1 ENCFF967OJF 180 bp overlap
ChIP HCT116 ENCFF568PEO 122 bp overlap
ChIP HepG2 ENCFF360ZSW 180 bp overlap
ChIP HepG2 ENCFF906QIS 180 bp overlap
ChIP HepG2 ENCFF963UBJ 180 bp overlap
ChIP Ishikawa ENCFF570JVV 180 bp overlap
ChIP MCF-7 ENCFF694KOM 180 bp overlap
ChIP MCF-7 ENCFF724VCQ 180 bp overlap
ChIP SK-N-SH ENCFF747MAS 180 bp overlap
ChIP liver ENCFF485PAC 180 bp overlap
ChIP liver ENCFF522JHE 180 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 131 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 180 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 180 bp overlap