chr3 : 113,833,346 113,833,724
378 bp 8 TFs 1 linked gene
This 378 bp open chromatin element is linked to GRAMD1C and is bound by 8 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GRAMD1C 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:113,828,346 – 113,838,724
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 194 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 194 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 248 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 378 bp overlap
ChIP DE DE-FOXA2-2 371 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 222 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 179 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 147 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 350 bp overlap
ChIP DE DE-GATA4-2 378 bp overlap
ChIP foregut GSE117136.GATA4.foregut 351 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 372 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 378 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 378 bp overlap
ChIP DE DE-GATA6-2 378 bp overlap
ChIP foregut GSE117136.GATA6.foregut 378 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 342 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 348 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 210 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 295 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 258 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 289 bp overlap