chr3 : 101,556,160 101,556,330
170 bp 6 TFs 1 linked gene
This 170 bp open chromatin element is linked to TRMT10C and is bound by 6 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TRMT10C 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:101,551,160 – 101,561,330
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
6 transcription factors
Source
Cell type
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 170 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 103 bp overlap
ChIP H1 ENCFF747ZPQ 170 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 145 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 170 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 146 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 170 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 170 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 170 bp overlap
ChIP hESC GSE20650.NANOG.hESC 137 bp overlap
ChIP hESC GSE18292.NANOG.hESC 67 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 170 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 52 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 118 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 85 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 170 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 123 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 124 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 170 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 170 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 151 bp overlap
SRF 1 dataset
ChIP H1 ENCFF036PEF 138 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 126 bp overlap