chr1 : 38,856,701 38,856,917
216 bp 9 TFs 2 linked genes
This 216 bp open chromatin element is linked to RRAGC and RRAGC-DT and is bound by 9 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
RRAGC at TSS At TSS Proximity
RRAGC-DT 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:38,851,701 – 38,861,917
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP HEK293T GSE115862.CTCF.HEK293T 199 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 216 bp overlap
ChIP DE DE-FOXA2-2 216 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 122 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 216 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 216 bp overlap
ChIP DE DE-GATA4-2 216 bp overlap
ChIP foregut GSE117136.GATA4.foregut 216 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 216 bp overlap
GATA6 5 datasets
ChIP AGS GSE51705.GATA6.AGS 159 bp overlap
ChIP DE DE-GATA6-1 216 bp overlap
ChIP DE DE-GATA6-2 216 bp overlap
ChIP foregut GSE117136.GATA6.foregut 216 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 182 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 209 bp overlap
ChIP K562 ENCFF348IBL 216 bp overlap
ChIP K562 ENCFF771OHZ 216 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 148 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 124 bp overlap