chr2 : 107,833,732 107,833,961
229 bp 4 TFs 1 linked gene
This 229 bp open chromatin element is linked to RGPD4 and is bound by CTCF, RAD21, SPI1, and ZNF654.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RGPD4 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:107,828,732 – 107,838,961
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
CTCF 65 datasets
ChIP 22Rv1 ENCFF466OXN 229 bp overlap
ChIP A549 ENCFF034FVO 229 bp overlap
ChIP A549 ENCFF182TCQ 208 bp overlap
ChIP A549 ENCFF669BWC 229 bp overlap
ChIP C4-2B ENCFF821XVN 229 bp overlap
ChIP D721Med ENCFF513FYD 188 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM13977 ENCFF528ESQ 168 bp overlap
ChIP GM23338 ENCFF531QOI 198 bp overlap
ChIP GM23338 ENCFF772DML 91 bp overlap
ChIP H1 ENCFF230QSV 128 bp overlap
ChIP H1 ENCFF414GZI 186 bp overlap
ChIP H1 ENCFF764RHO 229 bp overlap
ChIP H54 ENCFF255TVO 82 bp overlap
ChIP H9 ENCFF152GTF 229 bp overlap
ChIP HEK293 ENCFF498RMM 184 bp overlap
ChIP HFFc6 ENCFF005CJI 229 bp overlap
ChIP HepG2 ENCFF127KUP 184 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF400DFR 197 bp overlap
ChIP LNCAP ENCFF700QXT 229 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP Loucy ENCFF359TVQ 229 bp overlap
ChIP MCF 10A ENCFF988BGF 229 bp overlap
ChIP MCF-7 ENCFF414SZG 152 bp overlap
ChIP MCF-7 ENCFF494VXA 221 bp overlap
ChIP MCF-7 ENCFF844STM 152 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP NB4 ENCFF155DNY 224 bp overlap
ChIP NCI-H929 ENCFF305JAB 229 bp overlap
ChIP Panc1 ENCFF056JQX 226 bp overlap
ChIP RWPE2 ENCFF911IEE 229 bp overlap
ChIP VCaP ENCFF858YQT 229 bp overlap
ChIP WTC11 ENCFF658QVH 229 bp overlap
ChIP brain ENCFF163BBN 229 bp overlap
ChIP brain ENCFF685VRG 229 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 229 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 163 bp overlap
ChIP chondrocyte ENCFF134ORZ 229 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 218 bp overlap
ChIP endodermal cell ENCFF471YCZ 229 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 229 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 229 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 151 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 229 bp overlap
ChIP heart left ventricle ENCFF354HOQ 229 bp overlap
ChIP heart right ventricle ENCFF027ORH 229 bp overlap
ChIP heart right ventricle ENCFF767XJQ 229 bp overlap
ChIP hepatocyte ENCFF263BLJ 229 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 229 bp overlap
ChIP nephron ENCFF411ACD 229 bp overlap
ChIP neural crest cell ENCFF182LWK 217 bp overlap
ChIP neural progenitor cell ENCFF420RBO 229 bp overlap
ChIP neural progenitor cell ENCFF581WPG 229 bp overlap
ChIP osteocyte ENCFF929FPD 229 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 217 bp overlap
ChIP right atrium auricular region ENCFF696NTN 216 bp overlap
ChIP right lobe of liver ENCFF011NDG 111 bp overlap
ChIP smooth muscle cell ENCFF656FBT 142 bp overlap
ChIP thyroid gland ENCFF163TUI 229 bp overlap
ChIP thyroid gland ENCFF204HWS 229 bp overlap
ChIP thyroid gland ENCFF300RYK 229 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 229 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 229 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 201 bp overlap
ChIP H1 ENCFF967OJF 204 bp overlap
ChIP Ishikawa ENCFF570JVV 181 bp overlap
ChIP K562 ENCFF634XYR 229 bp overlap
SPI1 1 dataset
ChIP HL-60 ENCFF645GBT 182 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCFF636WIC 120 bp overlap