chr2 : 88,007,136 88,007,355
219 bp 13 TFs 2 linked genes
This 219 bp open chromatin element is linked to RNU2-63P and ENSG00000287670 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RNU2-63P 9.2 kb Proximal Proximity
ENSG00000287670 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:88,002,136 – 88,012,355
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 121 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 219 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 219 bp overlap
EGR1 3 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 150 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 124 bp overlap
ChIP K562 ENCFF006PJY 219 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 83 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 88 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 86 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 219 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 65 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 104 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 144 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 219 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 185 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 219 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 138 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 108 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 157 bp overlap