chr1 : 32,811,261 32,811,574
313 bp 13 TFs 2 linked genes
This 313 bp open chromatin element is linked to YARS1 and S100PBP and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
YARS1 5.8 kb Proximal Proximity
S100PBP 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:32,806,261 – 32,816,574
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF460KDD 174 bp overlap
ChIP BLaER1 ENCFF896HSY 208 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 313 bp overlap
ChIP DE DE-FOXA2-2 313 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 313 bp overlap
ChIP DE DE-GATA4-2 313 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 313 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 313 bp overlap
ChIP DE DE-GATA6-2 313 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 313 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 313 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 313 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 313 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 219 bp overlap
GLYR1 1 dataset
ChIP HeLa GSE20303.GLYR1.HeLa 100 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 89 bp overlap
ChIP K562 ENCFF648YPL 67 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 225 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 313 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 313 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 313 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 313 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 313 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 179 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 260 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 313 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 185 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 254 bp overlap