chr2 : 47,989,585 47,990,018
433 bp 13 TFs 1 linked gene
This 433 bp open chromatin element is linked to VN1R18P and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
VN1R18P at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:47,984,585 – 47,995,018
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP A-549 GSE85352.ARNT.A-549 212 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 182 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 313 bp overlap
ChIP DE DE-FOXA2-2 378 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 239 bp overlap
GATA2 2 datasets
ChIP TF1 GSE73207.GATA2.TF1 323 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 143 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 199 bp overlap
ChIP DE DE-GATA4-1 433 bp overlap
ChIP DE DE-GATA4-2 420 bp overlap
ChIP foregut GSE117136.GATA4.foregut 373 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 331 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 348 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 433 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 354 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 433 bp overlap
ChIP foregut GSE117136.GATA6.foregut 407 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 380 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 259 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 232 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 151 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 433 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 326 bp overlap