chrY : 2,834,375 2,834,575
200 bp 9 TFs 1 linked gene
This 200 bp open chromatin element is linked to RPS4Y1 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RPS4Y1 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrY:2,829,375 – 2,839,575
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 126 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 176 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 200 bp overlap
ChIP DE DE-FOXA2-2 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 200 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 200 bp overlap
ChIP DE DE-GATA4-2 200 bp overlap
ChIP foregut GSE117136.GATA4.foregut 200 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 200 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 200 bp overlap
ChIP DE DE-GATA6-2 200 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 200 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 200 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 200 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 200 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 200 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 200 bp overlap
ChIP foregut GSE117136.GATA6.foregut 200 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 197 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 200 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 200 bp overlap
MAFK 2 datasets
ChIP A549 ENCFF371EPR 131 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 62 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 200 bp overlap