chrX : 55,868,198 55,868,947
749 bp 12 TFs 2 linked genes
This 749 bp open chromatin element is linked to ENSG00000227486 and RRAGB and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000227486 39.7 kb Distal Multiome
RRAGB 150.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:55,863,198 – 55,873,947
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 50 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 567 bp overlap
ChIP DE DE-FOXA2-2 308 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 652 bp overlap
ChIP DE DE-GATA4-2 749 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 747 bp overlap
ChIP DE DE-GATA6-2 749 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 749 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 749 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 749 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 422 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 494 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 274 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 575 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 499 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 149 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 215 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 630 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 276 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 749 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 749 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 749 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 749 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 749 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 749 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 749 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 749 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 747 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 749 bp overlap