chrX : 23,341,923 23,342,130
207 bp 12 TFs 1 linked gene
This 207 bp open chromatin element is linked to PTCHD1 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PTCHD1 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:23,336,923 – 23,347,130
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP RS4-11 GSE59541.BCL6.RS4-11 85 bp overlap
CTCF 6 datasets
ChIP GP5D GSE51234.CTCF.GP5D 118 bp overlap
ChIP brain ENCFF163BBN 159 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 72 bp overlap
ChIP nephron ENCFF589HXU 207 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 67 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 73 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 65 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 207 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 145 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 139 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 207 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 172 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 104 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 207 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 205 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 63 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 72 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 207 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 207 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 99 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 110 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 207 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 207 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 207 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 168 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 66 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 55 bp overlap
SMARCA4 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 107 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 131 bp overlap