chr22 : 46,333,222 46,333,540
318 bp 12 TFs 1 linked gene
This 318 bp open chromatin element is linked to TRMU and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TRMU 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:46,328,222 – 46,338,540
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 71 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 318 bp overlap
ChIP DE DE-FOXA2-2 318 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 318 bp overlap
ChIP DE DE-GATA4-2 318 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 318 bp overlap
ChIP DE DE-GATA6-2 318 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 318 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 318 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 318 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 318 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 318 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 318 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 318 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 318 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 305 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 318 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 311 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 318 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 318 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 318 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 318 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 318 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 318 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 318 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 318 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 318 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 216 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 318 bp overlap