chr2 : 18,568,623 18,569,011
388 bp 9 TFs 1 linked gene
This 388 bp open chromatin element is linked to RDH14 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RDH14 8.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:18,563,623 – 18,574,011
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 388 bp overlap
ChIP DE DE-FOXA2-2 388 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 337 bp overlap
ChIP DE DE-GATA4-2 361 bp overlap
ChIP foregut GSE117136.GATA4.foregut 216 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 360 bp overlap
ChIP DE DE-GATA6-2 357 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 304 bp overlap
ChIP foregut GSE117136.GATA6.foregut 267 bp overlap
Nanog 1 dataset
Motif DE_48h DE_48h-Nanog_MA2339.1 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 224 bp overlap
ZNF85 1 dataset
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap