chr18 : 54,227,157 54,227,856
699 bp 13 TFs 1 linked gene
This 699 bp open chromatin element is linked to MBD2 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MBD2 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:54,222,157 – 54,232,856
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 275 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 401 bp overlap
ChIP DE DE-FOXA2-2 477 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 528 bp overlap
ChIP DE DE-GATA4-2 572 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 593 bp overlap
ChIP DE DE-GATA6-2 558 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 357 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 376 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 389 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 383 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 356 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 429 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 262 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 505 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 426 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 457 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 325 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 478 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 476 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 358 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 494 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 319 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 444 bp overlap
ChIP K562 ENCFF875HLX 317 bp overlap